In recent years, the field of neural machine translation (NMT) for SPARQL query generation has witnessed a significant growth. Recently, the incorporation of the copy mechanism with traditional encoder-decoder architectures and the use of pre-trained encoder-decoders have set new performance benchmarks. This paper presents a large variety of experiments that replicate and expand upon recent NMT-based SPARQL generation studies, comparing pre-trained and non-pre-trained models, question annotation formats, and the use of a copy mechanism for non-pre-trained and pre-trained models. Our results show that either adding the copy mechanism or using a question annotation improves performances for nonpre-trained models and for pre-trained models, setting new baselines for three popular datasets.