Due to the contradiction of medical image processing, that is, the application of medical images is more and more widely and the limitation of medical images is difficult to label, few-shot learning technology has begun to receive more attention in the field of medical image processing. This paper proposes a Cross-Reference Transformer for medical image segmentation, which addresses the lack of interaction between the existing Cross-Reference support image and the query image. It can better mine and enhance the similar parts of support features and query features in high-dimensional channels. Experimental results show that the proposed model achieves good results on both CT dataset and MRI dataset.